Differences between revisions 102 and 110 (spanning 8 versions)
Revision 102 as of 2010-08-26 20:14:16
Size: 6983
Editor: leif
Comment: Update *some* package version columns. (Still *many* are out of date!)
Revision 110 as of 2017-02-02 01:27:16
Size: 8798
Editor: mrennekamp
Comment: add sources to find spkg's, add description of what an spkg is
Deletions are marked like this. Additions are marked like this.
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Browse the [[https://git.sagemath.org/sage.git/tree/build/pkgs|GitRepo]] to see all of the included spkgs. (see below)
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|| [[spkg/ECM|ECM]] || N/A || 6.2.1 || 6.2.1 || || [[spkg/ECM|ECM]] || N/A || 6.2.1.p2 || 6.3 ||
Line 20: Line 21:
|| [[spkg/flint|flint]] || Burcin Erocal, William Stein || 1.5.0.p5 || ? || || [[spkg/flint|flint]] || Burcin Erocal, William Stein || 1.5.0.p5 || 1.5.2/1.6 incompatible: 2.2 ||
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|| [[spkg/fortran|fortran]] || || || || || [[spkg/fortran|fortran]] || ? || 20100629 || N/A ||
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|| [[spkg/genus2reduction|genus2reduction]] || William Stein || 0.3.p4 || 0.3 || || [[spkg/genus2reduction|genus2reduction]] || William Stein || 0.3.p6 || 0.3? ||
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|| [[spkg/gmp|gmp]] || || || || || [[spkg/glpk|glpk]] || ? || 4.44 || >=4.44 ||
|| [[spkg/gmp|gmp]] || || (optional; see MPIR) || 5.0.2 ||
Line 38: Line 40:
|| [[spkg/jmol|jmol]] || Josh Kantor, William Stein, Ted Kosan || 11.6.RC8 || 11.6.RC8 || || [[spkg/jmol|jmol]] || Josh Kantor, William Stein, Ted Kosan, Jonathan Gutow || 12.3.27 || 12.2.X ||
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|| [[spkg/lcalc|lcalc]] || William Stein || 20080205.p2 || 20080205 || || [[spkg/lcalc|lcalc]] || Rishikesh || 20100428-1.23.p1 || 1.23 ||
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|| [[spkg/mercurial|mercurial]] || William Stein || 1.3.1.p2 || >=1.4.3 || || [[spkg/mercurial|mercurial]] || William Stein || 1.3.1.p2 || 1.6.3 ||
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|| [[spkg/mpfr|mpfr]] || N/A || 3.2.2 || 3.2.2 ||
|| [[spkg/networkx|networkx]] || Robert Miller || 0.36.p1 || 0.36 ||
|| [[spkg/ntl|ntl]] || [[WilliamStein|William Stein]] || 5.4.2.p4 || 5.4.2 ||
|| [[spkg/mpfr|mpfr]] || N/A || 2.4.2 || 3.0.1 ||
|| [[spkg/mpir|mpir]] || ? || 1.2.2.p1 || 2.4.0
||
|| [[spkg/networkx|networkx]] || Robert Miller || 1.2.p1 || ? ||
|| [[spkg/ntl|ntl]] || [[WilliamStein|William Stein]] || 5.4.2.p12 || 5.5.2 ||
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|| [[spkg/pari|pari]] || [[WilliamStein|William Stein]], Craig Citro, Jeroen Demeyer || 2.4.3 svn-12577 (upcoming Sage 4.6) || 2.3.5 || || [[spkg/pari|pari]] || [[WilliamStein|William Stein]], Craig Citro, Jeroen Demeyer || 2.4.3.alpha.p5 || 2.3.5? ||
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|| [[spkg/pynac|pynac]] || William Stein, Burcin Erocal || 0.1.1 || 0.1.1 || || [[spkg/pynac|pynac]] || William Stein, Burcin Erocal || 0.2.0.p5 || ? ||
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|| [[spkg/r|r]] || [[WilliamStein|William Stein]] || 2.6.1.r21 || 2.6.1||
|| [[spkg/readline|readline]] || N/A || 5.2.p4 || 5.2 ||
|| [[spkg/r|r]] || [[WilliamStein|William Stein]] || 2.10.1.p3 || ? ||
|| [[spkg/readline|readline]] || N/A || 6.0.p2 || >=6.1 ||
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|| [[spkg/rubiks|rubiks]] || Robert Bradshaw || 20070912.p8 || 20070912|| || [[spkg/rubiks|rubiks]] || Robert Bradshaw || 20070912.p8 || 20070912 ||
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|| [[spkg/singular|singular]] || [[MartinAlbrecht|Martin Albrecht]] || 3-0-4-4-20080711.p2 || 3-0-4-4-20080711 || || [[spkg/singular|singular]] || [[MartinAlbrecht|Martin Albrecht]] || 3-1-1-4.p0 || >=3-1-1-4 ||
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|| [[spkg/sphinx|Sphinx]] || Mike Hansen || 0.5 || 0.5 || || [[spkg/sphinx|Sphinx]] || Mike Hansen || 0.6.3.p4 || ? ||
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|| [[spkg/twisted|twisted]] || Mike Hansen || 8.1.0.p1 || 8.1.0|| || [[spkg/twisted|twisted]] || Mike Hansen || 8.1.0.p1 || 8.1.0 ||
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|| [[spkg/zodb|zodb]] || N/A || 3.7.0.p1 || 3.7.0 ||
|| [[spkg/zodb|zodb]] || N/A || 3.7.0.p4 || 3.7.0 ||
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== What is a spkg? ==

Files with the extension ".spkg" are known as Sage packages. The directory {{{SAGE_ROOT/spkg/standard}}} contains the standard SPKG's. In a source install of Sage, this directory contains all the standard Sage spkg files (actually .tar or .tar.bz2 files), which are the source code that defines Sage. In a binary install, some of these may be small placeholder files to save space.

Sage packages are distributed as ".spkg" files, which are .tar.bz2 files (or tar files) but have the extension ".spkg" to discourage confusion. Although Sage packages are packed using tar and/or bzip2, please note that ".spkg" files contain control information (installation scripts and metadata) that are necessary for building and installing them. For source distributions, when you compile Sage the file {{{SAGE_ROOT/makefile}}} takes care of the unpacking, compilation, and installation of Sage packages for you. For more information on the structure of {{{.spkg}}} files, please refer to the Sage Developer's Guide
in your local installation of Sage at
{{{
SAGE_ROOT/sage/doc/output/html/en/developer/index.html
}}}
If you cannot locate that file in your local installation of Sage, you might want to consider (re)building the standard Sage documentation using this command:
{{{
SAGE_ROOT/sage -docbuild all html
}}}
or refer to the [[http://www.sagemath.org/doc/developer/|online Sage developer's guide]]. Additional Sage packages can be found at the [[http://www.sagemath.org/download-packages.html|packages download page]].

Standard SPKGs

Browse the GitRepo to see all of the included spkgs. (see below)

Spkg

Current spkg Maintainer(s)

Version in Sage

Latest Stable Release

atlas

Josh Kantor

3.8.3.p14

3.9.23

BLAS

Josh Kantor, William Stein

Boehm garbage collector

N/A

7.1.p6

7.1

bzip2

Cddlib

William Stein

094b.p3

094b

clisp

William Stein

2.46.p7

2.46

Conway Polynomials

William Stein

?

?

Cvxopt

William Stein, Josh Kantor

0.9.p7

0.9

Cython

Robert Bradshaw

0.12.1

?

docutils

Mike Hansen

0.5

0.5

ECM

N/A

6.2.1.p2

6.3

eclib

John Cremona, William Stein, Ralph Philip Weinmann

20080310.p7

20080310

elliptic_curves

examples

extcode

f2c

flint

Burcin Erocal, William Stein

1.5.0.p5

1.5.2/1.6 incompatible: 2.2

flintqs

?

20070817.p5

?

fortran

?

20100629

N/A

freetype

William Stein

2.3.5.p0

2.3.5

gap

David Joyner, Robert Miller, William Stein

4.4.10.p10

4.4.10

gd

N/A

2.0.35.p0

2.0.35

gdmodule

?

0.56.p7

?

genus2reduction

William Stein

0.3.p6

0.3?

gfan

Marshall Hampton, William Stein

0.3.p4

0.3

ghmm

William Stein

20080803

20080803

givaro

Clement Pernet, Martin Albrecht

3.2.13rc1

3.2.12.rc1

glpk

?

4.44

>=4.44

gmp

(optional; see MPIR)

5.0.2

gnutls

graphs

gsl

William Stein

1.14

1.14

iml

William Stein, Martin Albrecht

1.0.1.p11

1.0.3

ipython

Mike Hansen

0.8.4.p0

0.10

jinja

Mike Hansen

1.2

1.2

jmol

Josh Kantor, William Stein, Ted Kosan, Jonathan Gutow

12.3.27

12.2.X

lapack

lcalc

Rishikesh

20100428-1.23.p1

1.23

libfplll

Martin Albrecht

2.1.6-20071129.p5

2.1.6

libgcrypt

N/A

1.4.0.p2

1.4.0

libgpg_error

N/A

1.6

1.6

libm4ri

Martin Albrecht

20100701.p1

20100701

libpng

N/A

1.2.35.p2

?

linbox

Clement Pernet, William Stein

1.1.6

1.1.6

matplotlib

Jason Grout

0.98.3.p4

0.99.1.1

maxima

William Stein

5.16.3

5.18.1

mercurial

William Stein

1.3.1.p2

1.6.3

moinmoin

Mike Hansen, William Stein

1.5.7.p2

1.5.7

mpfi

Carl Witty

1.3.4-cvs20071125.p7

1.3.4-cvs20071125

mpfr

N/A

2.4.2

3.0.1

mpir

?

1.2.2.p1

2.4.0

networkx

Robert Miller

1.2.p1

?

ntl

William Stein

5.4.2.p12

5.5.2

numpy

Jason Grout, Josh Kantor

1.2.0.p0

1.2.0

opencdk

N/A

0.6.6

0.6.6

palp

N/A

1.1.p1

1.1

pari

William Stein, Craig Citro, Jeroen Demeyer

2.4.3.alpha.p5

2.3.5?

pexpect

William Stein

2.0.p1

2.0

polybori

Burcin Erocal

0.6.4.p4

?

pycrypto

N/A

2.0.1.p2

2.0.1

pygments

Mike Hansen

0.11.1

0.11.1

pynac

William Stein, Burcin Erocal

0.2.0.p5

?

pyprocessing

William Stein, Mike Hansen, Tom Boothby

?

?

python

William Stein

2.6.4.p9

2.7.x

python_gnutls

N/A

1.1.4.p3

1.1.4

quaddouble

N/A

2.2.p9

2.2

r

William Stein

2.10.1.p3

?

readline

N/A

6.0.p2

>=6.1

rpy

rubiks

Robert Bradshaw

20070912.p8

20070912

sage

sage_scripts

scipy

Josh Kantor, William Stein

scipy-20071020-0.6.p4

0.7.1

scipy_sandbox

Josh Kantor

20071020.p3

20071020

scons

N/A

scons-0.97.0d20071212

scons-0.97.0d20071212

setuptools

Jaap Spies

0.6c8.p1

0.6c8

singular

Martin Albrecht

3-1-1-4.p0

>=3-1-1-4

sqlalchemy

Yi Qiang

0.4.6.p0

0.4.6

sqlite

N/A

3.5.3.p3

3.5.3

Sphinx

Mike Hansen

0.6.3.p4

?

symmetrica

Mike Hansen

2.0.p2

2.0

sympow

William Stein

1.018.1.p6

1.018.1

SymPy

Ondřej Čertík

0.6.3.p0

0.6.6

tachyon

William Stein

0.98beta.p11

0.98.9(!)

termcap

William Stein

1.3.1.p0

1.3.1

twisted

Mike Hansen

8.1.0.p1

8.1.0

weave

zlib

N/A

1.2.3.p4

1.2.3

zn_poly

David Harvey

0.9.p0

0.9

zodb

N/A

3.7.0.p4

3.7.0

Optional SPKGs

Spkg

Current spkg Maintainer(s)

Version in Sage

Latest Stable Release

biopython

Marshall Hampton

1.49b

1.51

fricas

Ralf Hemmecke

1.0.8

1.0.8

knoboo

William Stein

knoboo-20080411

knoboo-20080411

lrs

Marshall Hampton

1.44

1.45

phcpack

Marshall Hampton

2.3.39.p0

2.3.39

SPKGs no longer standard

Spkg

Current spkg Maintainer(s)

Version in Sage

Latest Stable Release

Removed In

pysqlite

ipython1

Sage 3.3

What is a spkg?

Files with the extension ".spkg" are known as Sage packages. The directory SAGE_ROOT/spkg/standard contains the standard SPKG's. In a source install of Sage, this directory contains all the standard Sage spkg files (actually .tar or .tar.bz2 files), which are the source code that defines Sage. In a binary install, some of these may be small placeholder files to save space.

Sage packages are distributed as ".spkg" files, which are .tar.bz2 files (or tar files) but have the extension ".spkg" to discourage confusion. Although Sage packages are packed using tar and/or bzip2, please note that ".spkg" files contain control information (installation scripts and metadata) that are necessary for building and installing them. For source distributions, when you compile Sage the file SAGE_ROOT/makefile takes care of the unpacking, compilation, and installation of Sage packages for you. For more information on the structure of .spkg files, please refer to the Sage Developer's Guide in your local installation of Sage at

SAGE_ROOT/sage/doc/output/html/en/developer/index.html

If you cannot locate that file in your local installation of Sage, you might want to consider (re)building the standard Sage documentation using this command:

SAGE_ROOT/sage -docbuild all html

or refer to the online Sage developer's guide. Additional Sage packages can be found at the packages download page.