ghmm-20080803 (William Stein, August 3, 2008)
Check out from svn export https://ghmm.svn.sourceforge.net/svnroot/ghmm/trunk/ghmm
- Copied /usr/share/libtool/ltmain.sh to src/
- Modified src/configure.in to remove check for libxml
- Modified src/ghmm/Makefile.am to remove xml targets
- Patch src/ghmm/smodel.c and src/ghmm/smodel.c to not build some xml functions.
- Patch src/tools/Makefile.am and Makefile.in to remove all references to xml
- Patch src/tests/Makefile.am and Makefile.in to remove all references to xml and read_fa
- Patch setup.py and ghmwrapper.i in src/ghmwrapper/ to not build xml wrapper
- Note there are some trivial changes in src/ that I haven't upstreamed yet. They are all typo fixes in the documentation of functions, etc.