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This page is outdated.

 - Up-to-date information for the latest Sage release can be found in the [[https://doc.sagemath.org/html/en/reference/spkg/ |Sage reference manual]].

 - Up-to-date information of the current development version can be found in the Sage source tree: [[https://git.sagemath.org/sage.git/tree/build/pkgs]].

 - The Sage [[http://doc.sagemath.org/html/en/developer/index.html|Developer Guide]] includes some information on including packages into the source code.

= SPKGs (outdated partial list) =

https://trac.sagemath.org/ticket/29655 will review the information below and include useful bits in the source tree.


||'''Spkg''' ||'''Upstream Weblink''' ||'''Includes a spkg-src? (NY = updates manually)''' ||'''Purpose''' ||'''Standard?''' ||
|| babel ||[[http://babel.pocoo.org/]] || NY ||Internationalization utilities ||Standard ||
|| backports_abc ||[[https://pypi.python.org/pypi/backports_abc]] || NY || Backports "collections.abc" (PyPi) ||Standard ||
|| backports_shutil_get_terminal_size || PyPi || NY || A backport of the get_terminal_size function from Python 3.3's shutil. ||Standard ||
|| backports_ssl_match_hostname || PyPi || NY || The ssl.match_hostname() function from Python 3.5 || Standard ||
|| beautifulsoup || [[https://www.crummy.com/software/BeautifulSoup/]] || ? || Screen-scraping library (sits atop html/xml parser) || "pip" ||
|| benzene || ? Assuming http://www.grinvin.org/ || NY || Efficient generation of all nonisomorphic fusenes and benzenoids || Optional ||
|| biopython || [[http://biopython.org/]] || ? || Python tools for computational molecular biology || "pip" ||
|| bliss || [[http://www.tcs.tkk.fi/Software/bliss]]|| (AUTO UPDATES) ||Computing automorphism groups and canonical forms of graphs || Optional ||
|| boost || [[http://www.boost.org/]]|| NY || "Portable C++ Libraries" || Optional ||
|| boost_cropped || Same as above || includes spkg-src || ? || Standard ||
|| brial || [[https://github.com/BRiAl/BRiAl]] || NY || Various; successor to PolyBoRi || Standard ||
|| brian || [[https://pypi.python.org/pypi/brian]] [[http://briansimulator.org/]] || ? || A clock-driven simulator for spiking neural networks || "pip" ||
|| buckygen || [[http://caagt.ugent.be/buckygen/]] || NY || Efficient generation of all nonisomorphic fullerenes || Optional ||
|| bzip2 || [[http://www.bzip.org/]] || (AUTO UPDATES) || Data compressor || Standard ||
|| cbc || [[https://projects.coin-or.org/Cbc]] || NY || Open-source mixed integer programming solver written in C++ || Optional ||
|| ccache || [[https://ccache.samba.org/]] || NY || Compiler cache; supports C, C++, Objective-C, and Objective-C++ || Optional ||
|| cddlib ||[[https://www.inf.ethz.ch/personal/fukudak/cdd_home/]]|| (AUTO UPDATES) ||C implementation of the Double Description Method of Motzkin||Standard||
|| cephes || [[http://www.moshier.net/]] || NY || Mathematical library in/for C || Standard||
|| certifi || [[http://certifi.io/]] || NY || Python package for providing Mozilla's CA Bundle || Standard ||
|| cliquier || [[https://users.aalto.fi/~pat/cliquer.html]] || (AUTO UPDATES) ||Set of C routines for finding cliques in an arbitrary weighted graph ||Standard||
|| cmake || [[https://cmake.org/]] || NY || CMake is a cross-platform build system generator || Experimental ||
|| combinatoral_designs || ? || NY || Data for combinatoral designs || Standard ||
|| compilerwrapper || [[https://bitbucket.org/vbraun/compilerwrapper]] || NY || A wrapper for compiler and binutils || Experimental ||
|| configparser || [[https://docs.python.org/3/library/configparser.html]] || NY || Exists for compatiblity with Python2 || Standard ||
|| configure || Auto-generated by Sage || Auto-generated by Sage || shipped in case sufficiently recent autotools not installed || Base ||
|| conway_polynomials || extends Sage library || NY? || Small database of Conway Polynomials || Standard ||
|| coxeter3 || [[http://math.univ-lyon1.fr/~ducloux/coxeter/coxeter3/english/coxeter3_e.html]] || NY || Wraps Fokko Ducloux's Coxeter 3 C++ library || Optional||
|| cryptominisat || [[https://www.msoos.org/]] || NY || (To be) an efficient sequential, parallel and distributed solver || Experimental ||
|| csdp || [[https://projects.coin-or.org/Csdp]] || (AUTO UPDATES) || A fast SDP solver written in C || Optional ||
|| cvxopt || [[http://cvxopt.org/]] || NY || Convex optimization based on Python || Standard ||
|| cycler || [[http://matplotlib.org/cycler/]] || NY || A small break of of matplotlib to deal with "composable cycles" || Standard ||
|| cysignals || [[https://github.com/sagemath/cysignals]] || NY || Interrupt and signal handling for Cython || Standard ||
|| cython || [[http://cython.org/]] || NY || C extensions for Python || Standard ||
|| d3js || [[https://d3js.org/]] || (AUTO UPDATES) || JavaScript library for manipulating documents based on data || Optional ||
|| database_cremona_ellcurve || [[https://github.com/JohnCremona/ecdata]] || NY || John Cremona's database of elliptic curves || Optional ||
|| database_gap || [[https://www.gap-system.org/]] || (AUTO UPDATE) || The databases of GAP: finite groups and tables of marks || Optional ||
|| database_kohel ||
|| database_mutation_class ||
|| database_odlyzko_zeta ||
|| database_pari ||
|| database_stein_watkins ||
|| database_stein_watkins_mini ||
|| database_symbolic_data ||
|| dateutil || [[https://pypi.python.org/pypi/python-dateutil]] || NY || Extensions to Python dateutil || Standard ||
|| decorator || ? || NY || "Better living through Python with decorators" || Standard ||
|| docutils || [[http://docutils.sourceforge.net/]] || NY || A modular system for processing documentation into useful formats, such as HTML, XML, and LaTeX.|| Standard ||
|| doc2tex || [[https://pypi.python.org/pypi/dot2tex]] || NY || A Graphviz to LaTeX converter || Optional ||
|| ecl || [[https://common-lisp.net/project/ecl/]] || (AUTO UPDATES) || Implementation of the Common Lisp language || Standard ||
|| eclib || [[https://github.com/JohnCremona/eclib]] || NY || Enumerating and computing with elliptic curves defined over the rational numbers || Standard ||
|| ecm || [[http://gforge.inria.fr/projects/ecm/]] || NY || Elliptic Curve Method for Integer Factorization || Standard ||
|| elliptic_curves || || NY || Two databases for elliptic curves, from John Cremona and William Stein || Standard ||
|| entrypoints || [[https://github.com/takluyver/entrypoints]] || NY, but also has special setup || Discover and load entry points from installed packages || Standard||
|| fflas_ffpak || [[http://www.linalg.org/linbox/fflas-ffpack/]] || NY || Source code library for dense linear algebra over word-size finite fields ||Standard ||
|| flask || [[http://flask.pocoo.org/]] || NY || Web micro-framework || Standard||
|| flask_autoindex || ? || NY || The mod_autoindex for Flask || Standard ||
|| flask_babel || ? || NY || Adds i18n/l10n support to Flask applications || Standard ||
|| flask_oldsessions || ? || NY || Provides a session class || Standard ||
|| flask_openid || ? || NY || OpenID support for Flask || Standard||
|| flask_silk || ? || NY || Adds silk icons to your Flask application or blueprint, or extension || Standard ||
|| flint || [[http://www.flintlib.org/]] || NY || Fast Library for Number Theory || Standard ||
|| flintqs || [[http://www.friedspace.com/QS/]] || NY || Multi-polynomial quadratic sieve for integer factorization || Standard ||
|| fyplll || [[https://github.com/fplll/fpylll]] || NY || Python interface for fpll (Lattice algorithms using floating-point arithmetic) || Standard ||
|| freetype || [[https://www.freetype.org/]] || NY || Software library to render fonts || Standard ||
|| fricas || [[https://fricas.sourceforge.net/]] || NY || Advanced CAS || Experimental ||
|| frobby || [[http://www.broune.com/frobby/]] || NY || Provides a number of computations on monomial ideals || Optional ||
|| functools32 || [[https://pypi.python.org/pypi/functools32]] || NY || Backport of the functools module from Python 3.2.3 || Standard ||
|| future || [[https://pypi.python.org/pypi/future/]] || NY || future is the missing compatibility layer between Python 2 and Python 3 || Standard ||