OSX 64-bit

Building Python 2.5.2 on OSX

• /configure --prefix=/Users/mabshoff/python-2.5.2-64 --with-gcc="gcc -m64" --enable-toolbox-glue=false

make && make install works, but there are various error message from gcc since it fails to build the toolbox glue on OSX, despite the above command disabling it.

Build Order of packages for 2.10.alpha2

• dir-0.1 - sources !solve!
• prereq-0.3 - sources !solve!
• sage_scripts-2.10.alpha2 - sources !solve!
• bzip2-1.0.4 - 32 bit enough? !solve!
• conway_polynomials-0.2 - database? !solve!
• gmp-4.2.1.p12 - must be 64 bit !solve!
• termcap-1.3.1 - must be 64 bit !solve!
• readline-5.2.p0 - must be 64 bit !solve!
• pari-2.3.3 - must be 64 bit !solve!
• ntl-5.4.1.p10 - must be 64 bit !solve!
• cremona-20071219.p1 - must be 64 bit !solve!
• graphs-20070722 - sources? !solve!
• elliptic_curves-0.1 - don't know !solve!
• extcode-2.10.alpha2 - sources? !solve!
• flint-1.05 - must be 64 bit !solve!
• zlib-1.2.3.p3 - must be 64 bit !solve!
• sqlite-3.5.3.p1 - must be 64 bit !solve!
• libgpg_error-1.5 - must be 64 bit !solve!
• libgcrypt-1.2.4 - must be 64 bit !solve!
• opencdk-0.5.9 - must be 64 bit !solve!
• gnutls-1.6.3 - must be 64 bit !solve!
• libpng-1.2.22.p3 - must be 64 bit !solve!
• python-2.5.1.p11 - must be 64 bit - see above
• freetype-2.3.5 - must be 64 bit
• gd-2.0.33.p5 - must be 64 bit - distutils (partially?)
• gdmodule-0.56.p4 - must be 64 bit - distutils
• fortran-20071120.p3 - must be 64 bit - build gcc 4.2.2 gfortran from source
• lapack-20071123.p0 - must be 64 bit
• atlas-3.8.p7 - skipped anyway
• gsl-1.9 - must be 64 bit
• iml-1.0.1.p8 - must be 64 bit
• ipython-0.8.1.p1 - python? - distutils?
• givaro-3.2.6.p5 - must be 64 bit
• linbox-20070915.p3 - must be 64 bit
• f2c-20070816 - must be 64 bit
• blas-20070724 - must be 64 bit
• numpy-20080104-1.0.4.p1 - must be 64 bit - distutils
• matplotlib-0.91.1.p1 - must be 64 bit - distutils
• mercurial-0.9.5.p0 - must be 64 bit
• mpfr-2.3.0.p0 - integarted into mpfr-2.3.0.p1
• pexpect-2.0.p1 - must be 64 bit - distutils
• mpfi-1.3.4-cvs20071125.p4 - must be 64 bit
• pycrypto-2.0.1.p1 - python - distutils
• cython-0.9.6.9 - python - distutils
• sympy-0.5.7 - python - distutils
• zodb3-3.7.0 - python only? - distutils
• networkx-0.35.1 - pure python - distutils
• quaddouble-2.2.p7 - must be 64 bit
• python_gnutls-1.1.1 - python - distutils
• twistedweb2-20070619 - python only? - distutils
• twisted-2.5.0.p8 - python only? - distutils
• singular-3-0-4-1-20071209.p3 - must be 64 bit
• scons-0.97 - python only - distutils
• symmetrica-2.0.p0 - must be 64 bit
• libfplll-2.1.6-20071129 - must be 64 bit
• polybori-0.1-r6 - must be 64 bit
• rpy-1.0.1.p0 - must be 64 bit
• r-2.6.1.p7 - must be 64 bit
• rubiks-20070912.p0 - must be 64 bit
• libm4ri-20071224 - must be 64 bit
• sage-2.10.alpha2 - must be 64 bit
• doc-2.10.alpha2 - doc
• examples-2.10.alpha2 - doc
• gap-4.4.10.p0 - 32 bit enough for now
• clisp-2.41.p12 - 32 bit enough for now
• maxima-5.13.0.p2 - 32 bit enough for now
• genus2reduction-0.3 - depends on libpari, so needs to be 64 bits
• lcalc-20070107.p0 - depends on libpari, so needs to be 64 bits
• sympow-1.018.1.p3 - 32 bit enough for now
• cddlib-094b.p0 - 32 bit enough for now
• gfan-0.2.2.p2 - 32 bit enough for now
• ecm-6.1.3 - 32 bit enough for now
• tachyon-0.98beta.p3 - 32 bit enough for now
• weave-0.4.9 - 32 bit enough for now
• flintqs-20070817.p1 - 32 bit enough for now
• palp-1.1 - 32 bit enough for now
• moin-1.5.7.p2 - python
• ipython1-20070130 - python
• scipy-20071020-0.6.p2 - python only?
• scipy_sandbox-20071020 - python only?
• cvxopt-0.9.p5 - no clue
• jmol-11.5.2 - java

Build Notes

Sage 2.10.alpha2 port to 64 bit OSX:

prereq-0.3

This is now #3172

gmp-4.2.1.p12

broken, need to update to 4.2.2, skip patching
add ABI=64, otherwise set ABI=32
Maybe: Our gmp 4.2.1 is FUBAR, i.e. Cygwin problems
Important: add extern __inline__ gmp-h.in fix for Darwin

termcap-1.3.1

This is now #3171

readline-5.2.p0

This is now #3170

eclib-20080310.p1

This is now #3173

flint-1.06

This is now #3174

zlib-1.2.3.p3

This is now #3175

sqlite-3.5.3.p1

This is now #3176

libpng-1.2.22.p3

if [ `uname` = "Darwin" -a "$SAGE64" = "yes" ]; then
   CFLAGS=" -m64 $CFLAGS -fPIC -g -I\"$SAGE_LOCAL/include\""
else
   CFLAGS="$CFLAGS -fPIC -g -I\"$SAGE_LOCAL/include\""
fi
export CFLAGS

Note: gd-2.0.35 requires a dynamic libpng12.dylib

freetype-2.3.5

if [ `uname` = "Darwin" -a "$SAGE64" = "yes" ]; then
   echo "64 bit MacIntel"
   CFLAGS="-O2 -g -m64 "; export CFLAGS
   CXXFLAGS="-O2 -g -m64 "; export CXXFLAGS
fi

gd-2.0.33.p5

Update to 2.0.35

# needed to pick up zlib.h
if [ `uname` = "Darwin" -a "$SAGE64" = "yes" ]; then
   CFLAGS=" -m64 $CFLAGS -fPIC -g -I\"$SAGE_LOCAL/include\" -I$SAGE_LOCAL/include/freetype2/"
else
   CFLAGS="$CFLAGS -fPIC -g -I\"$SAGE_LOCAL/include\" -I$SAGE_LOCAL/include/freetype2/"
fi
export CFLAGS

Makefile.am: add "-m64"

fortran-20071120.p3

gfortran 4.2.2 compiled from scratch.

Add "-m64" to sage_fortran options, link x86_64 libgfortran.dylib

iml-1.0.1.p8

if [ `uname` = "Darwin" -a "$SAGE64" = "yes" ]; then
   echo "64 bit MacIntel"
   CFLAGS="-O2 -g -m64 "; export CFLAGS
   CPPFLAGS="-O2 -g -m64 "; export CPPFLAGS
fi

linbox-20070915.p3

if [ `uname` = "Darwin" -a "$SAGE64" = "yes" ]; then
   echo "64 bit MacIntel"
   CFLAGS="-O2 -g -m64 "; export CFLAGS
   CXXFLAGS="-O2 -g -m64 "; export CXXFLAGS
   CPPFLAGS="-O2 -g -m64 "; export CPPFLAGS
fi

f2c-20070816

uncomment "CFLAGS = -O" in f2c/makefile uncomment "CFLAGS = -O -fPIC" in libf2c/makefile

if [ `uname` = "Darwin" -a "$SAGE64" = "yes" ]; then
   echo "64 bit MacIntel"
   CFLAGS="-O2 -g -m64 "
else
   CFLAGS="-fPIC"
fi

Dual architecture static lib is created, but f2c works

mpfi

if [ `uname` = "Darwin" -a "$SAGE64" = "yes" ]; then
   echo "64 bit MacIntel"
   CFLAGS="-O2 -g -m64 "; export CFLAGS
   CXXFLAGS="-O2 -g -m64 "; export CXXFLAGS
   CPPFLAGS="-O2 -g -m64 "; export CPPFLAGS
fi

quaddouble-2.2.p7

CXXFLAGS='-fPIC -O3 -Dx86 -m64'
export CXXFLAGS

twisted-2.5.0.p8

depends on pymactoolbox.h?

gcc -fno-strict-aliasing -Wno-long-double -no-cpp-precomp -mno-fused-madd -DNDEBUG -g -O3 -Wall -Wstrict-prototypes -m64 -I/Users/mabshoff/sage-2.10.alpha2/local/include/python2.5 -c twisted/internet/cfsupport/cfsupport.c -o build/temp.macosx-10.3-i386-2.5/twisted/internet/cfsupport/cfsupport.o -w
In file included from twisted/internet/cfsupport/cfsupport.c:8:
/Users/mabshoff/sage-2.10.alpha2/local/include/python2.5/pymactoolbox.h:138: error: syntax error before ‘Track’
/Users/mabshoff/sage-2.10.alpha2/local/include/python2.5/pymactoolbox.h:140: error: syntax error before ‘Movie’
/Users/mabshoff/sage-2.10.alpha2/local/include/python2.5/pymactoolbox.h:142: error: syntax error before ‘MovieController’
/Users/mabshoff/sage-2.10.alpha2/local/include/python2.5/pymactoolbox.h:146: error: syntax error before ‘UserData’
/Users/mabshoff/sage-2.10.alpha2/local/include/python2.5/pymactoolbox.h:148: error: syntax error before ‘Media’
error: command 'gcc' failed with exit status 1
Error: Subprocess exited with result 1 for project core
Error installing Twisted networking framework

real    0m5.832s
user    0m1.288s
sys     0m0.744s
sage: An error occurred while installing twisted-2.5.0.p8
Please email sage-devel http://groups.google.com/group/sage-devel
explaining the problem and send the relevant part of
of /Users/mabshoff/sage-2.10.alpha2/install.log.  Describe your computer, operating system, etc.
If you want to try to fix the problem, yourself *don't* just cd to
/Users/mabshoff/sage-2.10.alpha2/spkg/build/twisted-2.5.0.p8 and type 'make'.
Instead type "/Users/mabshoff/sage-2.10.alpha2/sage -sh"
in order to set all environment variables correctly, then cd to
/Users/mabshoff/sage-2.10.alpha2/spkg/build/twisted-2.5.0.p8
(When you are done debugging, you can type "exit" to leave the
subshell.)
make[1]: *** [installed/twisted-2.5.0.p8] Error 1

singular-3-0-4-1-20071209.p3

CXXFLAGS="$CXXFLAGS -fPIC -O3 -g -m64"; export CXXFLAGS
CFLAGS="$CFLAGS -fPIC -O3 -g -m64"; export CFLAGS
CPPFLAGS="$CXXFLAGS -fPIC -O3 -g -m64"; export CPPFLAGS

polybori

64 bit MacIntel
Starting build...
Running build_polybori...
scons: Reading SConscript files ...
KeyError: 'PYTHONHOME':
  File "/Users/mabshoff/sage-2.10.alpha2/spkg/standard/polybori-0.1-r6/src/PolyBoRi-0.1/SConstruct", line 105:
    env=Environment(ENV = {'PATH': os.environ['PATH']}, options=opts,tools = tools, toolpath = '.')
  File "/Users/mabshoff/sage-2.10.alpha2/local/lib/scons-0.97/SCons/Environment.py", line 779:
    options.Update(self)
  File "/Users/mabshoff/sage-2.10.alpha2/local/lib/scons-0.97/SCons/Options/__init__.py", line 145:
    execfile(filename, values)
  File "custom.py", line 13:
    PYPREFIX=os.environ['PYTHONHOME']
  File "/Users/mabshoff/sage-2.10.alpha2/local/lib/python2.5/UserDict.py", line 22:
    raise KeyError(key)
Error building PolyBoRi.

== sagelib== sage -b: devel/sage/c_lib/SConstruct

## We want the debug and optimization flags, since debug symbols are so useful, etc.
env.Append( CFLAGS="-O2 -g -m64" )
env.Append( CXXFLAGS="-O2 -g -m64" )

libm4fri

CFLAGS="$CFLAGS -fPIC $INCLUDES -L$SAGE_LOCAL/lib -m64"
CXXFLAGS="$CXXFLAGS -fPIC $INCLUDES -L$SAGE_LOCAL/lib -m64"
CPPFLAGS="$INCLUDES -m64"

numpy, scipy & friends

With Python 2.5.2. compiler with --with-gcc="gcc -m64" numpy builds fine. More investigation is needed here.

Done (incomplete list)

• givaro-3.2.6.p10
• gsl-1.10
• libfplll
• mpfr-2.3.0.p0
• ntl-5.4.2
• symmetrica-2.0.p2
• pari-2.3.3
• libgpg_error
• libgcrypt
• opencdk
• gnutls-1.6.3