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== Fast evaluation of symbolic expressions == || Mentor || Vincent Delecroix, Isuru Fernando (?) || || Area || Symbolic expression || || Skills || Basic math background in algebra and analysis. Fluent in Python and C/C++. Kowledge of compilers, assembler, Cython, or parallelization (openmp) would be interesting. || The simplest example of a function is given by univariate polynomials such as `P(x) = x^3 - 2*x + 3`. A more complex function is `F: (x, y) -> (cos(sqrt(x) + 1) * sin(y), tan(x^2 + 2) + y)`. For this project we are interested in making the evaluation of such expression at given concrete values fast and reliable. SageMath already has a "compiler" for symbolic expression that is used through `fast_callable` {{{ sage: x, y = SR.var('x,y') sage: f = cos(sqrt(x) + 1) * sin(y) sage: g = fast_callable(f, vars=[x,y], domain=float) sage: g(2.3, 3.5) 0.2844686555174862 }}} The objetive of this project is to rewrite the code for fast callable using the more modern project [[https://github.com/symengine/symengine|symengine]]. Doing so the applicant is likely to contribute to both symengine and SageMath projects. Here is a potential list of subtasks 1. '''more data types''' in symengine * Making numpy arrays support more types such as * integers ([[https://gmplib.org/|GMP]] `mpz_t` and [[http://www.flintlib.org/|flint]] `fmpz_t`) * rationals ([[https://gmplib.org/|GMP]] `mpq_t` and [[http://www.flintlib.org/|flint]] `fmpq_t`) * real numbers ([[https://www.mpfr.org/|MPFR]] `mpfr_t`) * intervals ([[https://gforge.inria.fr/projects/mpfi/|MPFI]] `mpfi_t`) and balls ([[http://arblib.org/|arb]] `arb_t` and `acb_t`) An example of such implementation are the [[https://github.com/moble/quaternion|quaternions]]. 3. '''optimization''' * Analyzing and optimizing accuracy (for floating points numbers). * Analyzing and optimizing the size of the evaluation tree: given an expression there are plenty of way to evaluate it. For example `P(x, y) = x^4 + 2*x^2*y + 3*x^2 + 2*x*y + 2*y^2 + 2*y + 1` can be evaluated naively. But we can also rewrite it as `P(x,y) = (x^2 + y + 1)^2 + (x + y)^2` and get another evaluation scheme. This problem of determining the optimal evaluation tree is known to be NP-complete. 4. Parallelization. Related projects * [[https://docs.sympy.org/latest/modules/codegen.html|sympy codegen]]. * The (now abandoned) project [[http://deeplearning.net/software/theano/|Theano]] might be of interest for optimization. |
GSoC 2022: Ideas Page
Introduction
Welcome to SageMath's Ideas Page for GSoC 2022! (Last year 2021)
Please subscribe to the sage-gsoc mailing list and the GAP developer list for discussion on possible GAP GSoC projects. Also, make sure you have gone through the information regarding application procedures, requirements and general advice. The Application Template is also available on that wiki page. Archives of past GSoC project ideas can be found here.
All projects will start with an introduction phase to learn about SageMath’s (or sister projects') internal organization and to get used to their established development process. We also require you to show us that you are able to execute actual development by submitting a relevant patch and/or reviewing a ticket via Trac of the project you are interested in applying to. The developer guide is a great comprehensive resource that can guide you through your first steps in contributing to SageMath.
Apart from the project ideas listed below, there is also a comprehensive list of future feature wishes in our trac issue tracker. They might contain the perfect project idea for you we didn't even think about!
Contents
Project Ideas
Here is a list of project proposals with identified mentors. Other well-motivated proposals from students involving SageMath in a substantial way will be gladly considered, as well.
Improve (free) module implementations
Mentor |
Travis Scrimshaw |
Area |
Linear Algebra, Performance, Refactoring |
Skills |
Understanding of linear algebra and object-oriented programming. Cython experience is highly recommended. |
Length |
Medium-term |
SageMath has multiple implementations of free modules:
1. Finite dimensional coordinate representations in the "standard" basis using FreeModule that provides both a dense and sparse implementation. 2. Using CombinatorialFreeModule (CFM) as (possibly infinite dimensional) sparse vectors.
There are various benefits to each implementation. However, they are largely disjoint and would mutually benefit from having a common base classes. In particular, having a dense implementation for CFM elements for applications that require heavier use of (dense) linear algebra. The goal of this project is to refactor these classes to bring them closer together (although they will likely remain separate as they are likely not fully compatible implementations for the parents).
Rewrite exterior algebra and implement Gröbner bases
Mentor |
Travis Scrimshaw |
Area |
Algebra, Performance |
Skills |
Understanding of abstract algebra and Cython. Knowledge of Gröbner basis is recommended. |
Length |
Medium-term and long-term variants |
The exterior (or Grassmann) algebra is a fundamental object in mathematics, in particular with applications to physics and geometry. It could be considered as the closest non-commutative analog of polynomials where the variables skew-commute with each other. The current implementation uses a basis indexed by subsets (as tuples), but a more efficient version would be indexed by integers encoding membership by the binary string. The first goal is to do this change (#32369). The second goal of this project would be to implement an algorithm for Gröbner basis for their ideals in order to construct quotient algebras. A variation of this project would be to improve the implementation of commutative graded algebras to not rely on the more generic plural for computations (except perhaps those involving ideals). For the ambitious, these computations would be extracted to an independent C++ library for many common rings (implemented using other libraries).
Implement Schubert and Grothendieck polynomials
Mentor |
Travis Scrimshaw |
Area |
Algebra, Combinatorics, Schubert Calculus |
Skills |
Foundations in combinatorics, experience reading research papers. |
Length |
Medium-term |
Schubert calculus can roughly be stated as the study of the intersections of lines, through which certain algebras arise that can be represented using Schubert polynomials and Grothendieck polynomials. The main goal of this project is to finish the implementation started in #6629, as well as implement the symmetric Grothendieck polynomials and their duals in symmetric functions.
Tensor operations in Sage using Python libraries as backends
Mentor |
Matthias Koeppe |
Area |
Linear/multilinear algebra |
Skills |
Solid knowledge of linear algebra, Python experience, ideally experience with numpy, PyTorch, JAX, or TensorFlow |
In this project, we develop new backends for the tensor modules from the SageManifolds project. Amongst the goals of the project are such elements as a fast implementation of tensor operations using numpy and using TensorFlow Core and PyTorch.
Enhanced optimization solver interfaces for Sage
Mentor |
Matthias Koeppe |
Area |
Optimization |
Skills |
Solid knowledge of linear optimization, Python experience, ideally experience with Python optimization interfaces |
See Meta-ticket #26511: Use Python optimization interfaces: cvxpy, PuLP, Pyomo, cylp...
Fast evaluation of symbolic expressions
Mentor |
Vincent Delecroix, Isuru Fernando (?) |
Area |
Symbolic expression |
Skills |
Basic math background in algebra and analysis. Fluent in Python and C/C++. Kowledge of compilers, assembler, Cython, or parallelization (openmp) would be interesting. |
The simplest example of a function is given by univariate polynomials such as P(x) = x^3 - 2*x + 3. A more complex function is F: (x, y) -> (cos(sqrt(x) + 1) * sin(y), tan(x^2 + 2) + y). For this project we are interested in making the evaluation of such expression at given concrete values fast and reliable. SageMath already has a "compiler" for symbolic expression that is used through fast_callable
sage: x, y = SR.var('x,y') sage: f = cos(sqrt(x) + 1) * sin(y) sage: g = fast_callable(f, vars=[x,y], domain=float) sage: g(2.3, 3.5) 0.2844686555174862
The objetive of this project is to rewrite the code for fast callable using the more modern project symengine. Doing so the applicant is likely to contribute to both symengine and SageMath projects. Here is a potential list of subtasks
more data types in symengine
optimization
- Analyzing and optimizing accuracy (for floating points numbers).
Analyzing and optimizing the size of the evaluation tree: given an expression there are plenty of way to evaluate it. For example P(x, y) = x^4 + 2*x^2*y + 3*x^2 + 2*x*y + 2*y^2 + 2*y + 1 can be evaluated naively. But we can also rewrite it as P(x,y) = (x^2 + y + 1)^2 + (x + y)^2 and get another evaluation scheme. This problem of determining the optimal evaluation tree is known to be NP-complete.
- Parallelization.
Related projects
The (now abandoned) project Theano might be of interest for optimization.